Source: mapdamage
Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
 Andreas Tille <tille@debian.org>,
 Étienne Mollier <emollier@debian.org>,
Section: science
Build-Depends:
 debhelper-compat (= 13),
 dh-sequence-python3,
 python3-all-dev:native,
 libpython3-all-dev,
 pybuild-plugin-pyproject,
 python3-setuptools,
 python3-pysam <!nocheck>,
 seqtk <!nocheck>,
 r-base-core <!nocheck>,
 r-cran-gam <!nocheck>,
 r-cran-ggplot2 <!nocheck>,
 r-cran-inline <!nocheck>,
 architecture-is-64-bit,
 architecture-is-little-endian,
Vcs-Browser: https://salsa.debian.org/med-team/mapdamage
Vcs-Git: https://salsa.debian.org/med-team/mapdamage.git
Homepage: https://ginolhac.github.io/mapDamage/

Package: mapdamage
Architecture: any
Depends:
 ${python3:Depends},
 ${shlibs:Depends},
 ${misc:Depends},
 r-base-core,
 r-cran-gam,
 r-cran-ggplot2,
 r-cran-inline,
 seqtk,
 python3-pysam,
 r-cran-rcpp,
 r-cran-rcppgsl,
 libopenblas-dev | libblas-dev   | libatlas-base-dev | libblas.so,
 libopenblas-dev | liblapack-dev | libatlas-base-dev | liblapack.so,
Description: tracking and quantifying damage patterns in ancient DNA sequences
 MapDamage is a computational framework written in Python and R, which
 tracks and quantifies DNA damage patterns among ancient DNA sequencing
 reads generated by Next-Generation Sequencing platforms.
 .
 MapDamage is developed at the Centre for GeoGenetics by the
 Orlando Group.
