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ImageInterface.h
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1//# ImageInterface.h: a base class for astronomical images
2//# Copyright (C) 1996,1997,1998,1999,2000,2001
3//# Associated Universities, Inc. Washington DC, USA.
4//#
5//# This library is free software; you can redistribute it and/or modify it
6//# under the terms of the GNU Library General Public License as published by
7//# the Free Software Foundation; either version 2 of the License, or (at your
8//# option) any later version.
9//#
10//# This library is distributed in the hope that it will be useful, but WITHOUT
11//# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
12//# FITNESS FOR A PARTICULAR PURPOSE. See the GNU Library General Public
13//# License for more details.
14//#
15//# You should have received a copy of the GNU Library General Public License
16//# along with this library; if not, write to the Free Software Foundation,
17//# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
18//#
19//# Correspondence concerning AIPS++ should be addressed as follows:
20//# Internet email: casa-feedback@nrao.edu.
21//# Postal address: AIPS++ Project Office
22//# National Radio Astronomy Observatory
23//# 520 Edgemont Road
24//# Charlottesville, VA 22903-2475 USA
25
26#ifndef IMAGES_IMAGEINTERFACE_H
27#define IMAGES_IMAGEINTERFACE_H
28
29
30//# Includes
31#include <casacore/casa/aips.h>
32#include <casacore/casa/Arrays/ArrayFwd.h>
33#include <casacore/images/Regions/RegionHandler.h>
34#include <casacore/images/Images/MaskSpecifier.h>
35#include <casacore/images/Images/ImageInfo.h>
36#include <casacore/images/Images/ImageAttrHandler.h>
37#include <casacore/lattices/Lattices/MaskedLattice.h>
38#include <casacore/coordinates/Coordinates/CoordinateSystem.h>
39#include <casacore/tables/LogTables/LoggerHolder.h>
40#include <casacore/tables/Tables/TableRecord.h>
41#include <casacore/casa/Quanta/Unit.h>
42
43namespace casacore { //# NAMESPACE CASACORE - BEGIN
44
45//# Forward Declarations
46template <class T> class LatticeIterInterface;
47template <class T> class COWPtr;
48class ImageRegion;
49class IPosition;
50class TiledShape;
51
52
53// <summary>
54// A base class for astronomical images.
55// </summary>
56
57// <use visibility=export>
58
59// <reviewed reviewer="" date="" tests="" demos="">
60// </reviewed>
61
62// <prerequisite>
63// <li> <linkto class=Lattice>Lattices</linkto>
64// <li> <linkto class=CoordinateSystem>CoordinateSystem</linkto>
65// </prerequisite>
66
67// <etymology>
68// The ImageInterface class name is derived from its role as the cookie cutter
69// Interface base class for Images.
70// </etymology>
71
72// <synopsis>
73// The ImageInterface class is an abstract base class. All Image classes
74// should derive from this class to ensure functions which operate on Images
75// will work for all Image derivations.
76//
77// An Image is currently defined as an Array of pixels, a Boolean mask,
78// defining which pixels are valid and coordinates to define the reference
79// frame. The only concrete class currently derived from this Interface is
80// PagedImage, which allows the image to be stored on disk, and only reads
81// specified portions of the image into memory.
82// </synopsis>
83
84// <example>
85// As this is an abstract base class it is not possible to construct an
86// instance of this object. It can however be used as a function argument.<br>
87// eg 1. (used in dImageInterface.cc)
88// <srcblock>
89// Float sumPixels(const ImageInterface<Float>& image){
90// uInt rowLength = image.shape()(0);
91// IPosition rowShape(image.ndim());
92// rowShape = 1; rowShape(0) = rowLength;
93// Float sumPix = 0;
94// RO_LatticeIterator<Float> iter(image, rowShape);
95// while(!iter.atEnd()){
96// sumPix += sum(iter.vectorCursor());
97// iter++;
98// }
99// return sumPix;
100// }
101// </srcblock>
102//
103// The main purpose of this class is for programming objects, the following
104// example is of how one would derive from ImageInterface: <br>
105// eg 2.
106// <srcblock>
107// template <class T> class myNewImage : public ImageInterface<T>
108// {
109// public:
110// // default constructor
111// myNewImage();
112//
113// // argumented constructor
114// myNewImage(...);
115//
116// // destructor
117// ~myNewImage
118//
119// // the shape function is forced upon us by the Lattice base class
120// IPosition shape() const;
121//
122// // doGetSlice is another function required of all Lattice objects.
123// Bool doGetSlice(<Array<T>& buffer, const Slicer& section);
124//
125// // etc...
126// private:
127// // put the actual map data down here.
128// // etc...
129// };
130// </srcblock>
131// </example>
132
133// <motivation>
134// The use of abstract base classes to guide inheritance seemed appropriate
135// for Images to ensure that CoordinateSystems and masking get handled
136// uniformly.
137// </motivation>
138
139// <todo asof="1995/04/25">
140// <li> replace ImageCoordinates
141// </todo>
142
143
144template <class T> class ImageInterface: public MaskedLattice<T>
145{
146 //# Make members of parent class known.
147public:
148 using MaskedLattice<T>::shape;
149
150public:
152
153 // Construct for a specific region handler object.
154 ImageInterface (const RegionHandler& regionHandler);
155
156 // Copy constructor (copy semantics).
158
160
161 // Make a copy of the derived object (reference semantics).
162 // <group>
163 virtual MaskedLattice<T>* cloneML() const;
164 virtual ImageInterface<T>* cloneII() const = 0;
165 // </group>
166
167 // Get the image type (returns name of derived class).
168 virtual String imageType() const = 0;
169
170 // Function which changes the shape of the image (N.B. the data is thrown
171 // away - the Image will be filled with nonsense afterwards)
172 virtual void resize (const TiledShape& newShape) = 0;
173
174 // Function which get and set the units associated with the image
175 // pixels (i.e. the "brightness" unit). <src>setUnits()</src> returns
176 // False if it cannot set the unit for some reason (e.g. the underlying
177 // file is not writable).
178 // <group>
179 virtual Bool setUnits (const Unit& newUnits);
180 virtual const Unit& units() const
181 { return unit_p; }
182 // </group>
183
184 // Return the name of the current ImageInterface object. This will generally
185 // be a file name for images that have a persistent form. Any path
186 // before the actual file name can be optionally stripped off.
187 virtual String name (Bool stripPath=False) const = 0;
188
189 // Functions to set or replace the coordinate information in the Image
190 // Returns False on failure, e.g. if the number of axes do not match.
191 // <group>
192 virtual Bool setCoordinateInfo (const CoordinateSystem& coords);
194 { return coords_p; }
195 // </group>
196
197 // Function to get a LELCoordinate object containing the coordinates.
199
200 // Get access to the LoggerHolder.
201 // <group>
203 { return log_p; }
204 const LoggerHolder& logger() const
205 { return log_p; }
206 // </group>
207
208 // Allow messages to be logged to this ImageInterface.
209 // <group>
211 { return logger().logio(); }
212 const LogIO& logSink() const
213 { return const_cast<ImageInterface<T>*>(this)->logSink(); }
214 // </group>
215
216 // Add the messages from the other image logger to this one.
217 void appendLog (const LoggerHolder& other)
218 { log_p.append (other); }
219
220 // Often we have miscellaneous information we want to attach to an image.
221 // This is where it goes.
222 // <br>
223 // Note that setMiscInfo REPLACES the information with the new information.
224 // It can fail if, e.g., the underlying table is not writable.
225 // <group>
226 const TableRecord& miscInfo() const
227 { return miscInfo_p; }
228 virtual Bool setMiscInfo (const RecordInterface& newInfo);
229 // </group>
230
231 // The ImageInfo object contains some miscellaneous information about the image
232 // which unlike that stored in MiscInfo, has a standard list of things,
233 // such as the restoring beam.
234 //
235 // Note that setImageInfo REPLACES the information with the new information.
236 // It is up to the derived class to make the ImageInfo permanent.
237 // <group>
238 const ImageInfo& imageInfo() const
239 { return imageInfo_p; }
240 // Get non-const access to the ImageInfo.
243 virtual Bool setImageInfo (const ImageInfo& info);
244 // </group>
245
246 // Get access to the attribute handler.
247 // By default an empty handler is returned where no groups can be added to.
248 // <group>
249 virtual ImageAttrHandler& attrHandler (Bool createHandler=False);
251 { return const_cast<ImageInterface<T>*>(this)->attrHandler(False); }
252 // </group>
253
254 // Can the image handle region definition?
256 { return regHandPtr_p->canDefineRegion(); }
257
258 // Make a mask which is suitable for the type of image.
259 // Optionally the mask can be initialized with the given value
260 // (by default it will not).
261 // <br>Optionally the mask can be defined as an image region/mask
262 // and turned in the default mask for the image. By default it will.
264 Bool defineAsRegion = True,
265 Bool setAsDefaultMask = True,
266 Bool initialize = False,
267 Bool value = True);
268
269 // Define a region/mask belonging to the image.
270 // The group type determines if it stored as a region or mask.
271 // If overwrite=False, an exception will be thrown if the region
272 // already exists.
273 // <br>An exception is thrown if canDefineRegion is False.
274 virtual void defineRegion (const String& name, const ImageRegion& region,
276 Bool overwrite = False);
277
278 // Does the image have a region with the given name?
279 virtual Bool hasRegion (const String& regionName,
281
282 // Get a region/mask belonging to the image from the given group
283 // (which can be Any).
284 // <br>Optionally an exception is thrown if the region does not exist.
285 // A zero pointer is returned if the region does not exist.
286 // The caller has to delete the <src>ImageRegion</src> object created.
288 (const String& name,
290 Bool throwIfUnknown = True) const;
291
292 // Rename a region.
293 // If a region with the new name already exists, it is deleted or
294 // an exception is thrown (depending on <src>overwrite</src>).
295 // The region name is looked up in the given group(s).
296 // <br>An exception is thrown if the old region name does not exist.
297 virtual void renameRegion (const String& newName,
298 const String& oldName,
300 Bool overwrite = False);
301
302 // Remove a region/mask belonging to the image from the given group
303 // (which can be Any).
304 // <br>Optionally an exception is thrown if the region does not exist.
305 virtual void removeRegion (const String& name,
307 Bool throwIfUnknown = True);
308
309 // Get the names of all regions/masks.
312
313 // Use the mask as specified.
314 // If a mask was already in use, it is replaced by the new one.
316
317 // Set the default pixelmask to the mask with the given name
318 // (which has to exist in the "masks" group).
319 // If the image table is writable, the setting is persistent by writing
320 // the name as a keyword.
321 // If the given regionName is the empty string,
322 // the default pixelmask is unset.
323 virtual void setDefaultMask (const String& regionName);
324
325 // Get the name of the default pixelmask.
326 // An empty string is returned if no default pixelmask.
327 virtual String getDefaultMask() const;
328
329 // Get a region belonging to the image.
330 // An exception is thrown if the region does not exist.
331 ImageRegion getRegion (const String& regionName,
333
334 // Make a unique region name from the given root name, thus make it such
335 // that the name is not already in use for a region or mask.
336 // The root name is returned if it is already unique.
337 // Otherwise a number is appended to the root name to make it unique.
338 // The number starts at the given number and is incremented until the name
339 // is unique.
341 uInt startNumber = 1) const;
342
343 // Check class invariants.
344 virtual Bool ok() const = 0;
345
346 // Save and restore an ImageInterface object to or from a state Record
348 Bool fromRecord (String& error, const RecordInterface& inRec);
349
350protected:
351 // Assignment (copy semantics) is only useful for derived classes.
353
354 // Restore the image info from the record.
356
357 // Set the image logger variable.
359 { log_p = logger; }
360
361 // Set the image info variable.
363
364 // Set the coordinate system variable.
366 { coords_p = coords; }
367
368 // Set the unit variable.
369 void setUnitMember (const Unit& unit)
370 { unit_p = unit; }
371
372 // Set the miscinfo variable.
374 { miscInfo_p.assign (rec); }
375
376 // Get access to the region handler.
379
380private:
381 // It is the job of the derived class to make these variables valid.
387
388 // The region handling object.
390
391 // The attribute handling object.
393};
394
395
396//# Declare extern templates for often used types.
397 extern template class ImageInterface<Float>;
398 extern template class ImageInterface<Complex>;
399
400
401} //# NAMESPACE CASACORE - END
402
403#ifndef CASACORE_NO_AUTO_TEMPLATES
404#include <casacore/images/Images/ImageInterface.tcc>
405#endif //# CASACORE_NO_AUTO_TEMPLATES
406#endif
virtual void removeRegion(const String &name, RegionHandler::GroupType=RegionHandler::Any, Bool throwIfUnknown=True)
Remove a region/mask belonging to the image from the given group (which can be Any).
const LoggerHolder & logger() const
LogIO & logSink()
Allow messages to be logged to this ImageInterface.
void appendLog(const LoggerHolder &other)
Add the messages from the other image logger to this one.
void setCoordsMember(const CoordinateSystem &coords)
Set the coordinate system variable.
LoggerHolder & logger()
Get access to the LoggerHolder.
virtual ImageAttrHandler & attrHandler(Bool createHandler=False)
Get access to the attribute handler.
virtual Bool setUnits(const Unit &newUnits)
Function which get and set the units associated with the image pixels (i.e.
ImageInfo & rwImageInfo()
Get non-const access to the ImageInfo.
ImageInterface(const RegionHandler &regionHandler)
Construct for a specific region handler object.
void setLogMember(const LoggerHolder &logger)
Set the image logger variable.
virtual void resize(const TiledShape &newShape)=0
Function which changes the shape of the image (N.B.
virtual void defineRegion(const String &name, const ImageRegion &region, RegionHandler::GroupType, Bool overwrite=False)
Define a region/mask belonging to the image.
virtual ImageInterface< T > * cloneII() const =0
virtual Bool setImageInfo(const ImageInfo &info)
const LogIO & logSink() const
virtual const Unit & units() const
virtual String imageType() const =0
Get the image type (returns name of derived class).
virtual ImageRegion makeMask(const String &name, Bool defineAsRegion=True, Bool setAsDefaultMask=True, Bool initialize=False, Bool value=True)
Make a mask which is suitable for the type of image.
Bool canDefineRegion() const
Can the image handle region definition?
const ImageInfo & imageInfo() const
The ImageInfo object contains some miscellaneous information about the image which unlike that stored...
virtual MaskedLattice< T > * cloneML() const
Make a copy of the derived object (reference semantics).
ImageAttrHandler & roAttrHandler() const
ImageAttrHandler itsBaseAttrHandler
The attribute handling object.
virtual String name(Bool stripPath=False) const =0
Return the name of the current ImageInterface object.
RegionHandler * getRegionHandler()
Get access to the region handler.
virtual String getDefaultMask() const
Get the name of the default pixelmask.
ImageRegion getRegion(const String &regionName, RegionHandler::GroupType=RegionHandler::Any) const
Get a region belonging to the image.
virtual ImageRegion * getImageRegionPtr(const String &name, RegionHandler::GroupType=RegionHandler::Any, Bool throwIfUnknown=True) const
Get a region/mask belonging to the image from the given group (which can be Any).
RegionHandler * regHandPtr_p
The region handling object.
void setImageInfoMember(const ImageInfo &imageInfo)
Set the image info variable.
virtual void useMask(MaskSpecifier=MaskSpecifier())
Use the mask as specified.
virtual Bool ok() const =0
Check class invariants.
ImageInterface & operator=(const ImageInterface &other)
Assignment (copy semantics) is only useful for derived classes.
virtual Bool setMiscInfo(const RecordInterface &newInfo)
virtual Bool hasRegion(const String &regionName, RegionHandler::GroupType=RegionHandler::Any) const
Does the image have a region with the given name?
virtual LELCoordinates lelCoordinates() const
Function to get a LELCoordinate object containing the coordinates.
virtual Bool setCoordinateInfo(const CoordinateSystem &coords)
Functions to set or replace the coordinate information in the Image Returns False on failure,...
void setMiscInfoMember(const RecordInterface &rec)
Set the miscinfo variable.
ImageInterface(const ImageInterface &other)
Copy constructor (copy semantics).
const CoordinateSystem & coordinates() const
Bool fromRecord(String &error, const RecordInterface &inRec)
String makeUniqueRegionName(const String &rootName, uInt startNumber=1) const
Make a unique region name from the given root name, thus make it such that the name is not already in...
virtual void setDefaultMask(const String &regionName)
Set the default pixelmask to the mask with the given name (which has to exist in the "masks" group).
virtual void renameRegion(const String &newName, const String &oldName, RegionHandler::GroupType=RegionHandler::Any, Bool overwrite=False)
Rename a region.
const TableRecord & miscInfo() const
Often we have miscellaneous information we want to attach to an image.
virtual Vector< String > regionNames(RegionHandler::GroupType=RegionHandler::Any) const
Get the names of all regions/masks.
Bool toRecord(String &error, RecordInterface &outRec)
Save and restore an ImageInterface object to or from a state Record.
Bool restoreImageInfo(const RecordInterface &rec)
Restore the image info from the record.
void setUnitMember(const Unit &unit)
Set the unit variable.
CoordinateSystem coords_p
It is the job of the derived class to make these variables valid.
LogIO & logio()
Get access to the logger.
MaskedLattice()
Default constructor.
const LatticeRegion & region() const
Get the region used.
GroupType
Define the possible group types (regions or masks).
String: the storage and methods of handling collections of characters.
Definition String.h:223
this file contains all the compiler specific defines
Definition mainpage.dox:28
const Bool False
Definition aipstype.h:42
unsigned int uInt
Definition aipstype.h:49
IPosition shape(const RecordFieldId &) const
Get the actual shape of this field.
RecordInterface()
The default constructor creates an empty record with a variable structure.
bool Bool
Define the standard types used by Casacore.
Definition aipstype.h:40
const Bool True
Definition aipstype.h:41
NewDelAllocator< T > NewDelAllocator< T >::value
Definition Allocator.h:368